SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074000324
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Muscle
Biosample name: RH3
Genomic region: chr1:111937465-111977065
Size: 39600
Super-enhancer rank 324
Number of SE elements: 15
ChIP density(Case|Control): 48787.2|3500.64
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCND3 ;
ROSE Overlap KCND3 ;
ROSE Proximal KCND3-AS1 ; LOC643355 ; KCND3 ;
ROSE Closest KCND3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KCND3 ; LOC643355 ; KCND3-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074000324 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers