SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074000160
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Muscle
Biosample name: RH3
Genomic region: chr20:2599035-2625825
Size: 26790
Super-enhancer rank 160
Number of SE elements: 6
ChIP density(Case|Control): 70889.019|4468.572
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NOP56 ;
ROSE Overlap TMC2 ;
ROSE Proximal SNORD86 ; NOP56 ; SNORD110 ; MIR1292 ; SNORA51 ; IDH3B ; SNORD57 ; SNORD56 ;
ROSE Closest NOP56 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA IDH3B ; NOP56 ; MIR1292 ; ZNF343 ; EBF4 ; SNORD57 ; SNORD56 ; SNORD86 ; SNORA51 ; SNORD110 ; TMC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074000160 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers