SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_073500490
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: PAR_Mantle cell lymphoma tissue_THZ1
Genomic region: chr9:127774976-127780958
Size: 5982
Super-enhancer rank 490
Number of SE elements: 1
ChIP density(Case|Control): 41388.2616|3192.5934
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH2D3C ;
ROSE Overlap SH2D3C ;
ROSE Proximal SH2D3C ; CDK9 ; TOR2A ; FPGS ; MIR2861 ; MIR3960 ;
ROSE Closest SH2D3C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C9orf117 ; TOR2A ; SH2D3C ; FPGS ; MIR3911 ; ENG ; MIR4672 ; MIR2861 ; PTRH1 ; TTC16 ; CDK9 ; AK1 ; MIR3960 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073500490 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers