SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_073500421
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: PAR_Mantle cell lymphoma tissue_THZ1
Genomic region: chr17:50145062-50163970
Size: 18908
Super-enhancer rank 421
Number of SE elements: 6
ChIP density(Case|Control): 46456.956|4747.7988
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R9B ;
ROSE Overlap PPP1R9B ;
ROSE Proximal SGCA ; COL1A1 ; PDK2 ; HILS1 ; SAMD14 ;
ROSE Closest PPP1R9B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HILS1 ; LOC284080 ; PPP1R9B ; ITGA3 ; SGCA ; PDK2 ; COL1A1 ; SAMD14 ; LOC101927230 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073500421 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers