SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_073500316
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: PAR_Mantle cell lymphoma tissue_THZ1
Genomic region: chr3:52291644-52353191
Size: 61547
Super-enhancer rank 316
Number of SE elements: 14
ChIP density(Case|Control): 56592.4665|7588.7451
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAH1 ;
ROSE Overlap GLYCTK ; MIR135A1 ; DNAH1 ;
ROSE Proximal PPM1M ; WDR82 ; GLYCTK-AS1 ; MIRLET7G ; GLYCTK ;
ROSE Closest DNAH1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GLYCTK-AS1 ; GLYCTK ; MIRLET7G ; TWF2 ; DNAH1 ; PPM1M ; MIR135A1 ; PHF7 ; WDR82 ; BAP1 ; TLR9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073500316 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers