SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_073500270
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: PAR_Mantle cell lymphoma tissue_THZ1
Genomic region: chr9:104746876-104780948
Size: 34072
Super-enhancer rank 270
Number of SE elements: 7
ChIP density(Case|Control): 62678.8512|8851.9056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NIPSNAP3B ;
ROSE Overlap NIPSNAP3B ; NIPSNAP3A ;
ROSE Proximal NIPSNAP3B ;
ROSE Closest NIPSNAP3B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NIPSNAP3B ; LOC286367 ; NIPSNAP3A ; OR13D1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073500270 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers