SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_073500216
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: PAR_Mantle cell lymphoma tissue_THZ1
Genomic region: chr9:136881415-136905322
Size: 23907
Super-enhancer rank 216
Number of SE elements: 4
ChIP density(Case|Control): 70814.9247|10660.1313
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4479 ;
ROSE Overlap TRAF2 ; MIR4479 ;
ROSE Proximal EDF1 ; FBXW5 ; MAMDC4 ; LCN12 ; C8G ; C9orf172 ; PHPT1 ;
ROSE Closest MIR4479 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA EDF1 ; CCDC183-AS1 ; PHPT1 ; C9orf142 ; PTGDS ; C9orf172 ; MIR4292 ; CCDC183 ; LCNL1 ; TRAF2 ; C8G ; MAMDC4 ; RABL6 ; FBXW5 ; LCN12 ; MIR4479 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073500216 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers