SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_073500020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: PAR_Mantle cell lymphoma tissue_THZ1
Genomic region: chr10:110771571-110894682
Size: 123111
Super-enhancer rank 20
Number of SE elements: 29
ChIP density(Case|Control): 239081.562|26456.5539
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDCD4-AS1 ;
ROSE Overlap PDCD4 ; PDCD4-AS1 ; RBM20 ;
ROSE Proximal PDCD4 ; SHOC2 ; BBIP1 ; RPL13AP6 ; MIR4680 ;
ROSE Closest PDCD4-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA BBIP1 ; PDCD4 ; PDCD4-AS1 ; MIR4680 ; SHOC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073500020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers