SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_073300461
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: L20_Mantle cell lymphoma tissue_THZ1
Genomic region: chr19:49920044-49929944
Size: 9900
Super-enhancer rank 461
Number of SE elements: 1
ChIP density(Case|Control): 39666.33|5837.04
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATF5 ;
ROSE Overlap NUP62 ; ATF5 ; IL4I1 ;
ROSE Proximal TBC1D17 ; IL4I1 ; AKT1S1 ; NUP62 ; MIR4751 ; SIGLEC11 ; ATF5 ; MIR4750 ; SIGLEC16 ;
ROSE Closest ATF5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TBC1D17 ; SIGLEC11 ; PTOV1 ; NUP62 ; AKT1S1 ; ATF5 ; MIR4750 ; PNKP ; IL4I1 ; MIR6800 ; PTOV1-AS1 ; PTOV1-AS2 ; SIGLEC16 ; MIR4751 ; MIR4749 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073300461 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers