SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_073300002
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: L20_Mantle cell lymphoma tissue_THZ1
Genomic region: chr3:177179690-177379143
Size: 199453
Super-enhancer rank 2
Number of SE elements: 40
ChIP density(Case|Control): 473601.1485|67953.6371
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00501 ;
ROSE Overlap LINC00501 ; TBL1XR1 ;
ROSE Proximal ;
ROSE Closest LINC00501 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TBL1XR1 ; LINC00501 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073300002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers