SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_073200554
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: L20_Mantle cell lymphoma tissue_DMSO
Genomic region: chr5:139386947-139394206
Size: 7259
Super-enhancer rank 554
Number of SE elements: 3
ChIP density(Case|Control): 37682.1949|7872.3855
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MZB1 ;
ROSE Overlap MZB1 ; PROB1 ;
ROSE Proximal PAIP2 ; DNAJC18 ; SLC23A1 ; SPATA24 ;
ROSE Closest MZB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PAIP2 ; TMEM173 ; ECSCR ; MATR3 ; PROB1 ; SPATA24 ; DNAJC18 ; SLC23A1 ; MZB1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073200554 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers