SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_073200514
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: L20_Mantle cell lymphoma tissue_DMSO
Genomic region: chr12:113141304-113175304
Size: 34000
Super-enhancer rank 514
Number of SE elements: 10
ChIP density(Case|Control): 50333.6|18788.4
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR7106 ;
ROSE Overlap MIR7106 ; DDX54 ; CCDC42B ;
ROSE Proximal RITA1 ; IQCD ; DDX54 ; RASAL1 ; TPCN1 ;
ROSE Closest MIR7106 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DDX54 ; RASAL1 ; TPCN1 ; CCDC42B ; MIR7106 ; RITA1 ; IQCD ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073200514 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers