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Super-enhancer overview

SE ID: SE_02_073200285
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: L20_Mantle cell lymphoma tissue_DMSO
Genomic region: chr5:141503988-141523393
Size: 19405
Super-enhancer rank 285
Number of SE elements: 7
ChIP density(Case|Control): 53280.3085|8441.175
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC5 ;
ROSE Overlap PCDHGB5 ; PCDHGB1 ; PCDHGC4 ; PCDHGA1 ; PCDHGA6 ; PCDHGB2 ; PCDHGA2 ; PCDHGA4 ; PCDHGB3 ; PCDHGC3 ; PCDHGA3 ; PCDHGA11 ; PCDHGA8 ; PCDHGA10 ; PCDHGA12 ; PCDHGA9 ; PCDHGB6 ; PCDHGA7 ; PCDHGC5 ; PCDHGB7 ; DIAPH1 ; PCDHGA5 ; PCDHGB4 ;
ROSE Proximal PCDHGC5 ; PCDHGC3 ; LOC100505658 ; PCDHGC4 ;
ROSE Closest PCDHGC5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PCDHGA11 ; PCDHGC4 ; PCDHGC3 ; PCDHGB7 ; PCDHGB8P ; LOC100505658 ; PCDHGC5 ; PCDHGA12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_073200285 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers