SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072800613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: I10_Mantle cell lymphoma tissue_DMSO
Genomic region: chr16:2467010-2475042
Size: 8032
Super-enhancer rank 613
Number of SE elements: 3
ChIP density(Case|Control): 33193.0432|4342.9024
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NTN3 ;
ROSE Overlap NTN3 ;
ROSE Proximal CCNF ; C16orf59 ; TBC1D24 ; ATP6V0C ; MIR6768 ; MIR6767 ; AMDHD2 ;
ROSE Closest NTN3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA AMDHD2 ; MIR3178 ; PDPK1 ; ATP6V0C ; CEMP1 ; CCNF ; MIR6767 ; NTN3 ; C16orf59 ; MIR6768 ; TBC1D24 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072800613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers