SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072800478
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: I10_Mantle cell lymphoma tissue_DMSO
Genomic region: chr10:110340508-110359655
Size: 19147
Super-enhancer rank 478
Number of SE elements: 8
ChIP density(Case|Control): 39624.7165|5221.3869
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMNDC1 ;
ROSE Overlap ;
ROSE Proximal SMNDC1 ;
ROSE Closest SMNDC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SMNDC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072800478 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers