SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072200419
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr17:43231364-43252559
Size: 21195
Super-enhancer rank 419
Number of SE elements: 7
ChIP density(Case|Control): 16608.402|1657.449
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNU2-1 ;
ROSE Overlap RNU2-1 ;
ROSE Proximal TMEM106A ; LINC00854 ;
ROSE Closest RNU2-1 ;
Lasso ;
PreSTIGE ;
ABC LOC105371795 ; HEXIM2 ; MAPT ; ARHGAP27 ; MAP3K14 ; SPATA32 ; MAP3K14-AS1 ; FMNL1 ; HEXIM1 ; ACBD4 ; PLCD3 ; NMT1 ; DCAKD ; KIF18B ; CCDC103 ; EFTUD2 ; DBF4B ; CCDC43 ; FZD2 ; GPATCH8 ;
BETA NBR1 ; RNU2-1 ; LOC101929767 ; TMEM106A ; LINC00854 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200419 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers