SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072200415
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr3:48465206-48475551
Size: 10345
Super-enhancer rank 415
Number of SE elements: 4
ChIP density(Case|Control): 15940.6105|912.429
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHISA5 ;
ROSE Overlap SHISA5 ; ATRIP ; TREX1 ;
ROSE Proximal PLXNB1 ; TMA7 ; CCDC51 ; SHISA5 ;
ROSE Closest SHISA5 ;
Lasso ;
PreSTIGE ;
ABC PLXNB1 ;
BETA TMA7 ; SHISA5 ; ATRIP ; CCDC51 ; FBXW12 ; PFKFB4 ; UCN2 ; MIR6823 ; PLXNB1 ; TREX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200415 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers