SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072200350
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr19:1250397-1267101
Size: 16704
Super-enhancer rank 350
Number of SE elements: 8
ChIP density(Case|Control): 17313.696|928.7424
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIDN ;
ROSE Overlap MIDN ;
ROSE Proximal C19orf24 ; CIRBP ; CIRBP-AS1 ; ATP5D ; STK11 ; CBARP ; EFNA2 ;
ROSE Closest MIDN ;
Lasso ;
PreSTIGE ;
ABC ARHGAP45 ; POLR2E ; GPX4 ; SBNO2 ; C19orf35 ; ABCA7 ; CNN2 ; CIRBP ; CIRBP-AS1 ; C19orf24 ; MIDN ; ATP5D ; CBARP ; STK11 ; MUM1 ; NDUFS7 ; GAMT ; DAZAP1 ; RPS15 ; C19orf25 ; PCSK4 ; REEP6 ; MEX3D ; MBD3 ; UQCR11 ; TCF3 ; ATP8B3 ; REXO1 ; ABHD17A ; ADAT3 ; SCAMP4 ; CSNK1G2 ; MIER2 ; SHC2 ; TPGS1 ; CDC34 ; BSG ; POLRMT ; FGF22 ; RNF126 ; FSTL3 ; PALM ; MISP ; PTBP1 ; TMEM259 ; WDR18 ; CFD ; MED16 ; R3HDM4 ; KISS1R ; ARID3A ; C2CD4C ; PLPP2 ;
BETA MUM1 ; C19orf26 ; CIRBP ; ATP5D ; EFNA2 ; CIRBP-AS1 ; C19orf24 ; STK11 ; SBNO2 ; MIDN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200350 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers