SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072200305
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr11:27388946-27416771
Size: 27825
Super-enhancer rank 305
Number of SE elements: 13
ChIP density(Case|Control): 23784.81|6099.24
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC34 ;
ROSE Overlap LGR4 ;
ROSE Proximal CCDC34 ;
ROSE Closest CCDC34 ;
Lasso ;
PreSTIGE ;
ABC CCDC34 ; LIN7C ; BDNF-AS ; FIBIN ; MUC15 ; ANO3 ;
BETA CCDC34 ; LGR4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200305 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers