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Super-enhancer overview

SE ID: SE_02_072200127
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr17:17681347-17753244
Size: 71897
Super-enhancer rank 127
Number of SE elements: 18
ChIP density(Case|Control): 30340.534|3357.5899
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAI1 ;
ROSE Overlap RAI1 ;
ROSE Proximal SMCR2 ; SMCR5 ; RAI1-AS1 ;
ROSE Closest RAI1 ;
Lasso ;
PreSTIGE ;
ABC RAI1 ; SMCR5 ; SREBF1 ; DRG2 ; GID4 ; ATPAF2 ; DRC3 ; TOM1L2 ; PEMT ; RASD1 ; MED9 ; NT5M ; COPS3 ; TOP3A ; SMCR8 ; LLGL1 ; SHMT1 ; CCDC144B ; ZNF286B ; PRPSAP2 ; FAM83G ; EPN2 ; FLCN ; PLD6 ; ADORA2B ;
BETA MIR33B ; RAI1-AS1 ; MIR6777 ; RAI1 ; SMCR5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200127 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers