SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_072200045
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr9:38023615-38069234
Size: 45619
Super-enhancer rank 45
Number of SE elements: 24
ChIP density(Case|Control): 46025.0091|4945.0996
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHB ;
ROSE Overlap SHB ;
ROSE Proximal ;
ROSE Closest SHB ;
Lasso ;
PreSTIGE ;
ABC SHB ; ALDH1B1 ; IGFBPL1 ; ANKRD18A ; FAM201A ; SLC25A51 ; DCAF10 ; GNE ; EBLN3P ; ZCCHC7 ; EXOSC3 ; TRMT10B ; FRMPD1 ; TOMM5 ; FBXO10 ; POLR1E ; ZBTB5 ; GRHPR ;
BETA SHB ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200045 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers