SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_072200030
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr12:122870871-122896648
Size: 25777
Super-enhancer rank 30
Number of SE elements: 6
ChIP density(Case|Control): 50283.1939|4817.7213
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS37B ;
ROSE Overlap VPS37B ;
ROSE Proximal HIP1R ;
ROSE Closest VPS37B ;
Lasso ;
PreSTIGE ;
ABC RSRC2 ; ZCCHC8 ; KNTC1 ; CLIP1 ; VPS33A ; DENR ; CCDC62 ;
BETA ARL6IP4 ; OGFOD2 ; HIP1R ; ABCB9 ; VPS37B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200030 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers