SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_072200003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr12:52870818-52952113
Size: 81295
Super-enhancer rank 3
Number of SE elements: 28
ChIP density(Case|Control): 118308.6135|10901.6595
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT8 ;
ROSE Overlap KRT18 ; KRT8 ;
ROSE Proximal KRT79 ; KRT8 ; KRT78 ;
ROSE Closest KRT8 ;
Lasso ;
PreSTIGE ;
ABC KRT5 ;
BETA KRT79 ; KRT78 ; KRT18 ; EIF4B ; KRT8 ; KRT4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers