SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071201474
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr16:2152709-2155445
Size: 2736
Super-enhancer rank 1474
Number of SE elements: 1
ChIP density(Case|Control): 11347.0128|526.1328
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD60 ;
ROSE Overlap RAB26 ; SNHG19 ; SNORD60 ;
ROSE Proximal CASKIN1 ; MIR6511B1 ; MIR3180-5 ; MIR4516 ; TRAF7 ; MLST8 ; PKD1 ; MIR6511B2 ;
ROSE Closest SNORD60 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ECI1 ; BRICD5 ; MLST8 ; DNASE1L2 ; E4F1 ; PGP ; PKD1 ; MIR6511B1 ; SNORD60 ; MIR3180-5 ; TRAF7 ; MIR1225 ; CASKIN1 ; RAB26 ; MIR4516 ; MIR6511B2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201474 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers