SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071201427
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr19:55654952-55656843
Size: 1891
Super-enhancer rank 1427
Number of SE elements: 1
ChIP density(Case|Control): 11570.4617|477.6666
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: U2AF2 ;
ROSE Overlap U2AF2 ;
ROSE Proximal ZNF580 ; EPN1 ; ZNF581 ; ZNF865 ; ZNF784 ; CCDC106 ;
ROSE Closest U2AF2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF524 ; ZNF581 ; U2AF2 ; EPN1 ; CCDC106 ; FIZ1 ; ZNF865 ; ZNF784 ; NLRP9 ; ZNF580 ; ZNF579 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201427 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers