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Super-enhancer overview

SE ID: SE_02_071201417
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr19:35110756-35128024
Size: 17268
Super-enhancer rank 1417
Number of SE elements: 5
ChIP density(Case|Control): 13864.4772|2717.9832
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6887 ;
ROSE Overlap LGI4 ; FXYD3 ; MIR6887 ;
ROSE Proximal FXYD1 ; FXYD5 ; FXYD3 ; FXYD7 ; HPN-AS1 ;
ROSE Closest MIR6887 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FXYD1 ; FXYD3 ; FXYD7 ; FXYD5 ; SCN1B ; HPN-AS1 ; MIR6887 ; HPN ; LGI4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201417 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers