SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071201376
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr12:120223984-120238598
Size: 14614
Super-enhancer rank 1376
Number of SE elements: 9
ChIP density(Case|Control): 13548.6394|2167.2562
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXN ;
ROSE Overlap PXN ;
ROSE Proximal PXN-AS1 ; GCN1 ; RPLP0 ; PXN ;
ROSE Closest PXN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PXN-AS1 ; SIRT4 ; MIR4498 ; GCN1L1 ; RNU4-1 ; RPLP0 ; PXN ; PLA2G1B ; RNU4-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201376 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers