SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071201345
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr19:41859250-41862144
Size: 2894
Super-enhancer rank 1345
Number of SE elements: 1
ChIP density(Case|Control): 12291.3968|712.5028
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPS19 ;
ROSE Overlap RPS19 ;
ROSE Proximal LYPD4 ; ARHGEF1 ; MIR6797 ; DMRTC2 ; CD79A ;
ROSE Closest RPS19 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DMRTC2 ; MIR6797 ; CD79A ; CEACAM3 ; LYPD4 ; ARHGEF1 ; RABAC1 ; RPS19 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201345 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers