SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071201304
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr19:47718397-47744331
Size: 25934
Super-enhancer rank 1304
Number of SE elements: 5
ChIP density(Case|Control): 15404.796|3597.0458
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GLTSCR2 ;
ROSE Overlap EHD2 ;
ROSE Proximal SNORD23 ; SEPW1 ; GLTSCR2 ; GLTSCR2-AS1 ;
ROSE Closest GLTSCR2 ;
Lasso ;
PreSTIGE ;
ABC DHX34 ; INAFM1 ; AP2S1 ; BBC3 ; CCDC9 ; SAE1 ; ZC3H4 ; TMEM160 ;
BETA SEPW1 ; TPRX1 ; GLTSCR2 ; CRX ; EHD2 ; SNORD23 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201304 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers