SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071201229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr11:130022514-130043912
Size: 21398
Super-enhancer rank 1229
Number of SE elements: 12
ChIP density(Case|Control): 15791.724|3517.8312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRDM10 ;
ROSE Overlap ;
ROSE Proximal APLP2 ; LINC00167 ; PRDM10 ;
ROSE Closest PRDM10 ;
Lasso ;
PreSTIGE ;
ABC ST14 ;
BETA LINC00167 ; PRDM10 ; APLP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers