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Super-enhancer overview

SE ID: SE_02_071201145
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr20:5057238-5079225
Size: 21987
Super-enhancer rank 1145
Number of SE elements: 7
ChIP density(Case|Control): 16316.5527|3553.0992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM230 ;
ROSE Overlap ;
ROSE Proximal PCNA-AS1 ; SLC23A2 ; PCNA ; CDS2 ; TMEM230 ;
ROSE Closest TMEM230 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PCNA-AS1 ; TMEM230 ; SLC23A2 ; CDS2 ; PCNA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201145 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers