SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071201094
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr12:50246459-50277246
Size: 30787
Super-enhancer rank 1094
Number of SE elements: 18
ChIP density(Case|Control): 18841.644|5754.0903
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LIMA1 ;
ROSE Overlap LIMA1 ;
ROSE Proximal MIR1293 ; LIMA1 ;
ROSE Closest LIMA1 ;
Lasso ;
PreSTIGE ;
ABC BCDIN3D ; LOC101927318 ;
BETA CERS5 ; LIMA1 ; MIR1293 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201094 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers