SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071201035
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr6:12310384-12343986
Size: 33602
Super-enhancer rank 1035
Number of SE elements: 11
ChIP density(Case|Control): 16753.9572|3205.6308
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EDN1 ;
ROSE Overlap ;
ROSE Proximal EDN1 ;
ROSE Closest EDN1 ;
Lasso ;
PreSTIGE ;
ABC EDN1 ; HIPSTR ; C6orf52 ; SYCP2L ; CD83 ; RNF182 ; GFOD1 ; ELOVL2-AS1 ; ELOVL2 ; TBC1D7 ; TBC1D7-LOC100130357 ; HIVEP1 ; TMEM170B ; NEDD9 ; SMIM13 ; SIRT5 ;
BETA EDN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071201035 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers