SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200878
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr7:140196792-140232002
Size: 35210
Super-enhancer rank 878
Number of SE elements: 9
ChIP density(Case|Control): 19073.257|4038.587
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: JHDM1D-AS1 ;
ROSE Overlap ;
ROSE Proximal JHDM1D-AS1 ; KDM7A ;
ROSE Closest JHDM1D-AS1 ;
Lasso ;
PreSTIGE ;
ABC MKRN1 ;
BETA KDM7A ; JHDM1D-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200878 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers