SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200759
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr5:43307892-43316355
Size: 8463
Super-enhancer rank 759
Number of SE elements: 4
ChIP density(Case|Control): 18368.9415|2190.2244
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMGCS1 ;
ROSE Overlap HMGCS1 ;
ROSE Proximal ;
ROSE Closest HMGCS1 ;
Lasso ;
PreSTIGE ;
ABC HMGCS1 ;
BETA HMGCS1 ; CCL28 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200759 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers