SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200686
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr4:38145615-38190586
Size: 44971
Super-enhancer rank 686
Number of SE elements: 14
ChIP density(Case|Control): 21703.0046|4524.0826
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D1 ;
ROSE Overlap ;
ROSE Proximal TBC1D1 ;
ROSE Closest TBC1D1 ;
Lasso ;
PreSTIGE ;
ABC TLR1 ; PGM2 ; C4orf19 ; RFC1 ; WDR19 ; FAM114A1 ; LOC439933 ; ARAP2 ; RELL1 ; KLF3-AS1 ; KLF3 ; TBC1D1 ; TLR6 ;
BETA TBC1D1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200686 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers