SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200610
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr12:12714425-12725439
Size: 11014
Super-enhancer rank 610
Number of SE elements: 4
ChIP density(Case|Control): 20299.9034|1886.6982
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDKN1B ;
ROSE Overlap CDKN1B ;
ROSE Proximal APOLD1 ; MIR613 ; GPR19 ;
ROSE Closest CDKN1B ;
Lasso ;
PreSTIGE ;
ABC CREBL2 ; DUSP16 ; LRP6 ; GPR19 ; BCL2L14 ; DDX47 ; MANSC1 ; EMP1 ; FAM234B ; LOH12CR2 ; HTR7P1 ; BORCS5 ; CDKN1B ; HEBP1 ; LOC100506314 ;
BETA MIR613 ; DDX47 ; APOLD1 ; CDKN1B ; GPR19 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200610 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers