SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200579
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr15:34301337-34340073
Size: 38736
Super-enhancer rank 579
Number of SE elements: 8
ChIP density(Case|Control): 25709.0832|6705.2016
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC12A6 ;
ROSE Overlap SLC12A6 ;
ROSE Proximal NUTM1 ; MIR1233-1 ; GOLGA8A ; NOP10 ; LPCAT4 ;
ROSE Closest SLC12A6 ;
Lasso ;
PreSTIGE ;
ABC AVEN ;
BETA EMC4 ; MIR1233-1 ; SLC12A6 ; NUTM1 ; LPCAT4 ; MIR1233-2 ; NOP10 ; GOLGA8A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200579 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers