SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200477
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr7:101099608-101141268
Size: 41660
Super-enhancer rank 477
Number of SE elements: 12
ChIP density(Case|Control): 25712.552|4682.584
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SERPINE1 ;
ROSE Overlap SERPINE1 ;
ROSE Proximal MIR4653 ; VGF ; AP1S1 ; NAT16 ; TRIM56 ;
ROSE Closest SERPINE1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MOGAT3 ; ZNHIT1 ; MIR4653 ; AP1S1 ; VGF ; TRIM56 ; PLOD3 ; SERPINE1 ; NAT16 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200477 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers