SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200476
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr11:67344988-67357748
Size: 12760
Super-enhancer rank 476
Number of SE elements: 5
ChIP density(Case|Control): 23191.3|2151.336
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POLD4 ;
ROSE Overlap POLD4 ; LOC100130987 ;
ROSE Proximal RAD9A ; CLCF1 ; PPP1CA ; TBC1D10C ; SSH3 ;
ROSE Closest POLD4 ;
Lasso ;
PreSTIGE ;
ABC GSTP1 ; C11orf72 ; NDUFV1 ;
BETA ADRBK1 ; POLD4 ; CARNS1 ; ANKRD13D ; TBC1D10C ; RAD9A ; PTPRCAP ; CLCF1 ; CORO1B ; PPP1CA ; RPS6KB2 ; LOC100130987 ; SSH3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200476 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers