SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200467
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr1:32933684-33009426
Size: 75742
Super-enhancer rank 467
Number of SE elements: 21
ChIP density(Case|Control): 31076.9426|9808.589
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF19B ;
ROSE Overlap RNF19B ; AK2 ;
ROSE Proximal HPCA ; TMEM54 ; AK2 ;
ROSE Closest RNF19B ;
Lasso ;
PreSTIGE ;
ABC ZBTB8A ; ZBTB8B ;
BETA TMEM54 ; RNF19B ; AK2 ; HPCA ; FNDC5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200467 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers