SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200373
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chrX:12946232-13014797
Size: 68565
Super-enhancer rank 373
Number of SE elements: 18
ChIP density(Case|Control): 27624.8385|3764.2185
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMSB4X ;
ROSE Overlap TMSB4X ;
ROSE Proximal TLR8-AS1 ; FAM9C ; TLR8 ;
ROSE Closest TMSB4X ;
Lasso ;
PreSTIGE ;
ABC TMSB4X ; PRPS2 ; HCCS ; MSL3 ; TCEANC ; RAB9A ; TRAPPC2 ; MOSPD2 ; OFD1 ; GEMIN8 ; FANCB ;
BETA FAM9C ; TLR8 ; TMSB4X ; TLR8-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200373 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers