SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200299
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr1:44801860-44820586
Size: 18726
Super-enhancer rank 299
Number of SE elements: 7
ChIP density(Case|Control): 29117.0574|2765.8302
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BTBD19 ;
ROSE Overlap BTBD19 ; PTCH2 ; TCTEX1D4 ; PLK3 ;
ROSE Proximal PTCH2 ; SNORD38A ; RPS8 ; SNORD38B ; SNORD55 ; BEST4 ; SNORD46 ;
ROSE Closest BTBD19 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD55 ; KIF2C ; RNU5D-1 ; SNORD46 ; SNORD38B ; SNORD38A ; RNU5F-1 ; BEST4 ; BTBD19 ; TCTEX1D4 ; RPS8 ; PLK3 ; PTCH2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200299 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers