SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_071200226
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr1:17185995-17236882
Size: 50887
Super-enhancer rank 226
Number of SE elements: 15
ChIP density(Case|Control): 36440.1807|5913.0694
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PADI1 ;
ROSE Overlap PADI1 ;
ROSE Proximal MIR3972 ; PADI3 ;
ROSE Closest PADI1 ;
Lasso ;
PreSTIGE ;
ABC NBPF1 ; LOC105376805 ; CROCC ; CROCCP2 ; ATP13A2 ; SZRD1 ; NECAP2 ; SDHB ; PADI2 ; MST1P2 ; RCC2 ;
BETA PADI4 ; PADI2 ; MIR3972 ; PADI3 ; PADI1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200226 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers