SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200210
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr5:140284864-140351213
Size: 66349
Super-enhancer rank 210
Number of SE elements: 20
ChIP density(Case|Control): 38787.6254|7278.4853
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PFDN1 ;
ROSE Overlap PFDN1 ; HBEGF ;
ROSE Proximal SLC4A9 ;
ROSE Closest PFDN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ANKHD1 ; SLC4A9 ; ANKHD1-EIF4EBP3 ; HBEGF ; PFDN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200210 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers