SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200142
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr12:50185286-50223346
Size: 38060
Super-enhancer rank 142
Number of SE elements: 14
ChIP density(Case|Control): 45192.444|6850.8
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LIMA1 ;
ROSE Overlap LIMA1 ;
ROSE Proximal MIR1293 ; CERS5 ;
ROSE Closest LIMA1 ;
Lasso ;
PreSTIGE ;
ABC NCKAP5L ; BCDIN3D-AS1 ;
BETA CERS5 ; COX14 ; LIMA1 ; MIR1293 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200142 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers