SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200108
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr19:47094279-47122339
Size: 28060
Super-enhancer rank 108
Number of SE elements: 5
ChIP density(Case|Control): 49264.942|4946.978
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZC3H4 ;
ROSE Overlap ZC3H4 ;
ROSE Proximal TMEM160 ; SAE1 ;
ROSE Closest ZC3H4 ;
Lasso ;
PreSTIGE ;
ABC PPP5D1 ; PTGIR ; GNG8 ; DACT3 ; DACT3-AS1 ; CALM3 ;
BETA SAE1 ; ZC3H4 ; TMEM160 ; NPAS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200108 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers