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Super-enhancer overview

SE ID: SE_02_071200059
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr18:9608989-9688403
Size: 79414
Super-enhancer rank 59
Number of SE elements: 19
ChIP density(Case|Control): 63912.3872|8822.8954
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4R1-AS1 ;
ROSE Overlap PPP4R1-AS1 ; PPP4R1 ;
ROSE Proximal RAB31 ;
ROSE Closest PPP4R1-AS1 ;
Lasso ;
PreSTIGE ;
ABC PPP4R1 ; PPP4R1-AS1 ; TWSG1 ; RALBP1 ; NDUFV2 ; GACAT2 ; RAB12 ; LOC100192426 ; NAPG ; APCDD1 ; VAPA ; RAB31 ;
BETA RAB31 ; PPP4R1 ; PPP4R1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200059 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers