SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_070500068
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: AsPC1 WT
Genomic region: chr1:202005062-202088512
Size: 83450
Super-enhancer rank 68
Number of SE elements: 27
ChIP density(Case|Control): 90167.725|9162.81
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ELF3 ;
ROSE Overlap RNPEP ; ELF3 ;
ROSE Proximal GPR37L1 ; TIMM17A ; ELF3 ; MIR6740 ;
ROSE Closest ELF3 ;
Lasso ;
PreSTIGE ;
ABC ARL8A ; ELF3 ; RNPEP ; TIMM17A ; SHISA4 ; IPO9 ; IPO9-AS1 ; LMOD1 ; LOC148709 ; PCAT6 ; PPP1R12B ; UBE2T ; NAV1 ; CSRP1 ; PHLDA3 ; LAD1 ; TMEM9 ; TMEM183A ; LOC100506747 ; CYB5R1 ; ADIPOR1 ; ASCL5 ; KIF21B ; KLHL12 ; RABIF ; C1orf106 ; CAMSAP2 ; DDX59 ; SOX13 ; SNRPE ; ZC3H11A ; ATP2B4 ; PRELP ; FMOD ; CHI3L1 ; ADORA1 ; PPFIA4 ; TMEM183B ; LOC101929224 ; ZNF281 ; KIF14 ; TNNT2 ; ZBED6 ; LINC00303 ;
BETA RNPEP ; MIR6740 ; TIMM17A ; ELF3 ; GPR37L1 ; ARL8A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_070500068 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers