SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_070200047
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: David_TC71
Genomic region: chr9:4630487-4667086
Size: 36599
Super-enhancer rank 47
Number of SE elements: 14
ChIP density(Case|Control): 29590.2915|3762.3772
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPAPDC2 ;
ROSE Overlap PPAPDC2 ; SPATA6L ;
ROSE Proximal CDC37L1 ; CDC37L1-AS1 ;
ROSE Closest PPAPDC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SPATA6L ; AK3 ; PPAPDC2 ; CDC37L1 ; CDC37L1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_070200047 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers